Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015830579.1_cds_XP_016504235.1_17700
CDS Infomation

[gene=LOC107822227] [db_xref=GeneID:107822227] [protein=uncharacterized protein LOC107822227] [protein_id=XP_016504235.1] [location=complement(join(13996..14350,14518..14994,17281..17347,18121..18349,18909..19084,20707..20764,25541..26152))] [gbkey=CDS]
Sequence

ATGGCTAATATTTCGATCTCACAGCTGCAGCAGATGATCGAGATGATCGGGCAACTCCGT
GAGGAGATCGACATGGTAAAGGCGGAGACCTTGGGGTGGAAAGAAGGTATGGATCGCTTT
GCTGCAGAAAATGAGACTGCCTTGTCCCAATTGTCATCGGCCGAAAGTCTGCTTCGAGGC
ATGAAAGAGAAGAGCTCTGTTCAGGAAAAGAAAATAGCGGCGGTCGAAGCTCGGTTGGCT
TCCAAACTTGAAAAGGCCAAATCTGAAGCTGAAAAGGCTAAAGCCGAGGTAGACACGATC
GTGACCGTCTACCGAGCCGATGCTGAAGTCACTCAAGTACAAGTGAGAGAGGCAGCCAAG
ACTGCTCAAACTCGAGCGTATTGGATTGCTGAACTTGCCAAGTGCCAATCTCGGAGGGAA
AACCTCGAGGAGATCCACACTCGAGGTTTCGATCTAGCCGATGAGATAATAAAGCCTAAA
GAGTGTGAAACCGAAGTTGCAGCGCTAGCCTCCAATGATGACGATGATGATGATGAGAGC
AAAAGCGGGTCCAAGAGCGGGGAGGACCTCGATGGAGAAGAAACTGCCCCCGGAGAAAAT
CAGGAACCTTATGTAACAGCTGGGTACTCGATTAGGTTCTACTTCAGTCGTCGTGAAGCT
ATCGAGCTTCATTTTGAGCTCGATACTGACTCGAGCTCGATATTGACTCGGGCTCGGATC
TCGAGTTCCATAACGCCACTTCATATCATAGTTCGATTTGGACTCGAGCCTGATAATGAC
TTTGAGCTCGGTATTGATCGGTCACTGAATCTTGAGCTTGGTAACCTGGCTTCAGATCTT
ATCTCGTTTGTCTTTATCTGTCGTCCGTTAACTTTAAACCCTGTTGTTATCACATGCGTC
AAATATAACACTGACCCTTTACACAAAAAAGGACAAAAAGGAAAAAGAAAAACAAGAACT
TATCCGAATGATGTGAAAGTAGAGCAACAAGTAGAACCAAAGCTTCACAAAAATCAGCTT
ATAATCTCAACATGGCTTCCCCAAGTTGATACTTGCTTCTTTTCTTGTTTGTCCGGTTGT
GCCGCATGCCATATTGTCTACAGGTTCAATTTGGCTTTTCAGTGGGCAAGATCTATGTTC
AATGATGATGAACCGTTGGCCTTCAAGAACATGCACGAATTTTCTGCGACGGATGGCTTT
GTAGAGATAACTGAATCCTTGGCAGACATGATAAAGTTCATCGCAAATGAGCCCTCCATG
GGTCTTTTCTACATTCAACATCATACTCAGAGTGCAGCTCCCAACCTTATCAATCTCAAG
AACAATATTCAGGAAAAATCTCGTGATGTGACTTTGCACGCGGAAGATTCAGAGGATTCT
ATCACCATGATCAGGTCGATGAAAGATTGTGGTGCCCCAATTGCTAATGAGATGATTAAA
GATCTGAGACATTCTCTAGCTGTTGTGTCGAAGAATAAGCAATTGAGAAAAGGGTTAATA
AGGCAGTCCAGGTCAACTTTTCAGTTAGGGCGAACTAGTTCTTGGAGTCCTGCCACTTGG
GGTCGAAGTACAGTTCCAGAATTGGATGGTGAGAGTGGTTATCTCTCAAATATTTTCAGG
TCAACGAAAGAAAAAGCTAATAGCTTCAAGTGGTCTCAATTAGAGTCCAAAGAATCTGAT
GTAACCTATACTGATGATGCACTATCAGCTGTAGCGGCCGGATCTTTGTTCTCAGTTTCA
GAGGCGAATGATGAAGAGTTGCCATTATCAAGTCCAACTAATAATGAGCTACAAGTGATG
CAGGTGAATATAAGCATGTCCAATGATCAACTGCTCTCTTCATCAGAAAAGTATGAAGAA
GTTATGGCTGATAAAGAAGCACAATTGGAGGAGTGGTTGGGAGGGATTGGCAATAGTAAT
ACTGGTCCCGGAGAAAATAAGCTTGGTCGTATCATTAGGGAGAGCTCTCACTAG

Peptide Sequence

PEP ID

XP_016504235.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107822227 [Nicotiana tabacum]
Sequence

MANISISQLQQMIEMIGQLREEIDMVKAETLGWKEGMDRFAAENETALSQLSSAESLLRG
MKEKSSVQEKKIAAVEARLASKLEKAKSEAEKAKAEVDTIVTVYRADAEVTQVQVREAAK
TAQTRAYWIAELAKCQSRRENLEEIHTRGFDLADEIIKPKECETEVAALASNDDDDDDES
KSGSKSGEDLDGEETAPGENQEPYVTAGYSIRFYFSRREAIELHFELDTDSSSILTRARI
SSSITPLHIIVRFGLEPDNDFELGIDRSLNLELGNLASDLISFVFICRPLTLNPVVITCV
KYNTDPLHKKGQKGKRKTRTYPNDVKVEQQVEPKLHKNQLIISTWLPQVDTCFFSCLSGC
AACHIVYRFNLAFQWARSMFNDDEPLAFKNMHEFSATDGFVEITESLADMIKFIANEPSM
GLFYIQHHTQSAAPNLINLKNNIQEKSRDVTLHAEDSEDSITMIRSMKDCGAPIANEMIK
DLRHSLAVVSKNKQLRKGLIRQSRSTFQLGRTSSWSPATWGRSTVPELDGESGYLSNIFR
STKEKANSFKWSQLESKESDVTYTDDALSAVAAGSLFSVSEANDEELPLSSPTNNELQVM
QVNISMSNDQLLSSSEKYEEVMADKEAQLEEWLGGIGNSNTGPGENKLGRIIRESSH

Transcript Sequence

Gene sequence data has not been registered.